Medical Disclaimer: This portal is a patient education and research archive. It does not provide medical advice. Consult qualified physicians before beginning any treatment or protocol.
Citizen Science & Clinical Research Archive

Evidence-Based Science & Pacing for ME/CFS and Long COVID

Bridging two decades of pioneering patient advocacy with contemporary post-viral immunology. Deciphering the shared physiological pathophysiology of classic ME/CFS and Long COVID: cellular mitochondrial failure, Post-Exertional Malaise (PEM), autonomic dysregulation (POTS), and persistent neuro-immune exhaustion.

Interactive Clinical Decision Support

Featured Clinical Calculators & Pacing Tools

Evidence-based physiological calculators, legal disability documentation engines, and viral serology interpreters.

Autonomic Hemodynamics

POTS Sodium & Electrolyte Comparator

Calculate daily sodium targets (up to 10g NaCl), compare Trioral vs LMNT vs Liquid I.V. vs Normalyte across 10 brands, and scan for MCAS excipient triggers.

Launch Brand Comparator →
Legal Evidentiary Aid

ME/CFS Disability RFC Letter Generator

Generate a customized Social Security Ruling 14-1p Residual Functional Capacity assessment letter for your treating physician to support SSDI, SSI, and ERISA claims.

Generate RFC Letter →
Viral Biomarker Interpretation

EBV & HHV-6 Viral Serology Interpreter

Decode EBV Early Antigen-D and HHV-6 IFA titers, identify abortive lytic replication, rule out chromosomally integrated ciHHV-6, and generate a physician exhibit.

Decode Serology Panel →
Bioenergetics & Pacing

Energy Envelope & Delayed Crash Meter

Budget daily points across 20 physical, cognitive, and sensory exertion metrics using the Workwell Foundation 70% rule to forecast 24–48h delayed PEM debt.

Calculate Energy Envelope →
Mast Cell Chronobiology

MCAS Stack Planner & 30-Excipient Scanner

Build a 7-slot daily chronobiology schedule to prevent the 3:00 AM histamine surge, prevent binder chelation traps, and scan pill labels for 30 mast cell triggers.

Plan MCAS Stack →
Clinical Treatment Protocols

Clinical Treatment Protocols Directory

Explore all 32 evidence-based clinical treatment monographs spanning antivirals, neuro-immune modulators (LDN, LDA), POTS hemodynamics, and mitochondrial protocols.

View All Treatment Guides →

Clinical Pillars & Management Frameworks

Explore restored and expanded monographs cited across international medical literature, academic conferences, and patient communities.

Disability & Legal Guide

The 4-part legal and medical roadmap: SSDI/ERISA functional standards, 2-day CPET testing documentation, Residual Functional Capacity (RFC) forms, and Administrative Law Judge (ALJ) appeal strategies.

Read Disability Series →

The Methylation Cycle Protocol

In-depth analysis of Dr. Richard Van Konynenburg's simplified protocol, MTHFR mutations, bioactive cobalamin (hydroxo/methyl B12), methylfolate (5-MTHF), and cellular SAMe synthesis.

Explore Methylation Protocols →

Glutathione & Mitochondrial Defense

Intracellular glutathione (GSH) depletion, Dr. Martin Pall's NO/ONOO- peroxynitrite cascade, cerebral lactic acid elevation, and oral liposomal vs. nebulized vs. IV delivery modalities.

View Glutathione Guide →

Emergency PEM Crash Protocol

Clinical 72-hour harm-reduction protocol: immediate sensory de-escalation, supine cerebral reperfusion, cellular redox stabilization, and copyable emergency action card.

Read Crash Protocol →

NASA 10-Minute Lean Test

Interactive stopwatch assistant and diagnostic evaluator for orthostatic intolerance and POTS. Generates copyable clinical summaries formatted for physicians.

Launch Lean Test →

Low-Dose Naltrexone (LDN)

Microglial TLR4 receptor antagonism, suppression of neuro-inflammation, morning vs. night dosing rules, and interactive micro-titration schedule calculator.

Explore LDN Guide →

Diagnostic Lab Workup Panel

Comprehensive 3-tier testing checklist: core exclusions, EBV/HHV-6 pathogen serologies, NK cytotoxicity, and 1-click printable physician order sheet.

View Lab Checklist →

Viral Immunology & Pathogen Persistence

Chronic Epstein-Barr Virus (EBV), enterovirus persistence in tissues, persistent SARS-CoV-2 antigen reservoirs, and Natural Killer (NK) cell cytotoxic suppression.

Explore Virology →

HHV-6 & Neuro-Inflammation

HHV-6A/B neurotropism, central microglial activation, chromosomal integration (ciHHV-6), and Dr. Bhupesh Prusty's findings on mitochondrial fragmentation.

View HHV-6 Research →

Dr. Paul Cheney Protocols

Diastolic cardiac dysfunction, left ventricular filling impairment, stroke volume reduction during upright posture, and cell-signaling peptide therapies.

View Cheney Archive →

Recovery & Remission Trajectories

Longitudinal retrospective on documented recovery cases, realistic remission benchmarks (Bell Disability Scale), and multi-modal pacing frameworks.

Read Patient Trajectories →

MCAS & Histamine Intolerance

Post-viral mast cell hyper-reactivity, dual H1/H2 histamine blockade, natural/prescription mast cell stabilizers, and low-histamine dietary management.

Explore MCAS Protocol →

Microclots & Endothelial Hypoxia

Resia Pretorius research on fibrin amyloid microclots, capillary hypoperfusion, fluorescence microscopy, and comparison of fibrinolytic enzymes (Nattokinase / Lumbrokinase).

View Microclot Research →

Mitochondrial ATP Restoration

Targeted cellular bioenergetics: Ubiquinol CoQ10, Acetyl-L-Carnitine, D-Ribose, NAD+ precursors, and Magnesium Malate with interactive phase-gated titration planner.

View ATP Protocol →

HRV Pacing & Vagus Nerve (taVNS)

Predict PEM crashes 24–48 hours in advance using morning RMSSD baselines. Evidence-based transcutaneous auricular vagus nerve stimulation parameters to restore parasympathetic balance.

Launch HRV Forecaster →

Dysautonomia & POTS Protocol

4-pillar hemodynamic management: high-sodium plasma volume expansion, WHO ORS osmolarity calculator, 30–40 mmHg abdominal compression, and targeted autonomic medications (Mestinon, Florinef).

Explore POTS Protocol →

COMPASS-31 Dysautonomia Screener

Mayo Clinic validated 31-question clinical instrument across 6 domains (Orthostatic, Vasomotor, GI, Bladder). Features an autonomic subtype differential engine (POTS vs OH vs Vasovagal Syncope).

Launch COMPASS-31 Screener →

Vagus Nerve Reset Protocol

Cranial Nerve X neuromodulation: interactive 0.1 Hz resonant breathing metronome, emergency vasovagal syncope counter-maneuvers, left cymba conchae taVNS map, and clinical device reviews.

Launch Vagus Reset Protocol →

Fatigue Doctor & Diagnostic Criteria

Find vetted ME/CFS and dysautonomia specialists. Features an interactive 2015 IOM diagnostic criteria evaluator, ICD-10 medical billing code helper (G93.32), and printable physician intake dossier.

Launch Specialist Guide →
Evidence-Based Clinical Decision Support

Interactive Clinical Screeners & Newly Expanded Research

Explore our validated diagnostic calculators, micro-titration engines, and peer-reviewed biomedical research archives for post-viral neuro-immune disorders:

🥗 Low-Histamine Food Compatibility Checker

Pre-rendered 150+ SIGHI food database with meal plate histamine load scoring and DAO inhibitor screening.

🔬 GPCR Autoantibodies & Vascular Phenotyping

Charité Berlin research on beta-adrenergic and muscarinic antibodies with interactive vascular phenotype interpreter.

🦠 SIBO, D-Lactic Acidosis & Gut Dysbiosis

3-gas breath test analyzer (H2, CH4, H2S) with targeted antimicrobial and prokinetic motility algorithms.

🧬 Long COVID & ME/CFS Biological Endotypes

Multi-system endotype classifier mapping viral persistence, microclots, autoimmune dysautonomia, and MCAS.

⚡ CoQ10 & Sublingual NADH Mitochondrial Synergy

Evidence-based dosing scheduler overcoming Complex I suppression with sublingual mucosal absorption rules.

💊 Low-Dose Naltrexone (LDN) Master Clinical Hub

Volumetric water dilution calculator (0.1–4.5 mg), compounding excipient guide, and side-effect troubleshooting.

🩹 Transdermal Nicotine Pulsed Protocol

nAChR displacement scheduler, matrix patch safety rules, and Jarisch-Herxheimer unmasking guidelines.

📊 2-Day CPET Disability & Bioenergetics Guide

Workwell protocol for documenting second-day VO2 max collapse, lactic acidosis thresholds, and SSA disability claims.

Interactive Aerobic Threshold (AT) Pacing Screener

Calculate your estimated anaerobic threshold heart rate using physiological 2-day CPET exercise guidelines from the Workwell Foundation. Setting continuous heart rate monitor alarms below this ceiling prevents cellular switch to anaerobic glycolysis and protects against multi-day Post-Exertional Malaise (PEM).

The Shared Pathophysiology: ME/CFS & Long COVID

Deciphering why post-viral neuro-immune syndromes share identical physiological disruptions.

For decades, patients suffering from Myalgic Encephalomyelitis were frequently mischaracterized due to standard blood panels appearing normal. However, the surge in Post-Acute Sequelae of SARS-CoV-2 (Long COVID) has validated key physiological hallmarks first illuminated by ME/CFS citizen scientists and pioneering clinicians:

Physiological Domain Observed Dysfunction Key Evidence & Biomarkers
Cellular Bioenergetics Premature shift from oxidative phosphorylation to anaerobic glycolysis at minimal exertion. Workwell 2-day CPET decline in VO2 peak, elevated ventricular lactate (PMID: 22438249).
Autonomic Regulation Orthostatic Intolerance, POTS, and impaired cerebral blood flow during upright posture. Tilt Table Testing, transcranial Doppler showing up to 30% reduction in cerebral perfusion (PMID: 32185448).
Immunological Exhaustion Depressed Natural Killer (NK) cell cytotoxicity and autoantibodies against GPCR receptors. Low perforin/granzyme expression; autoantibodies targeting β2-adrenergic and M3-acetylcholine receptors (PMID: 24700057).
Pathogen Persistence Latent herpesvirus reactivation (EBV, HHV-6) and persistent viral RNA fragments in deep tissues. Digital droplet PCR; biopsy confirmation in muscle, stomach, and vascular endothelium (PMID: 34220757).

About ME/CFS was founded in the mid-2000s by citizen science pioneer Cort Johnson (later founder of Phoenix Rising and Health Rising) to bridge the vast chasm between laboratory discoveries and homebound patients. This restored 2026 archive ensures that foundational scientific data, clinical protocols, and disability guidance remain permanently open-access and citeable.

Master Clinical Index

Complete 76-Topic Clinical & Research Archive Directory

Comprehensive, peer-reviewed clinical monographs, treatment protocols, and diagnostic guides across the Myalgic Encephalomyelitis and Long COVID spectrum.

Clinical Protocols (32)

Diagnostics & Guides (32)